Package: ggseg3d 2.1.2

Athanasia Mo Mowinckel

ggseg3d: Interactive 3D Brain Atlas Visualization

Plot brain atlases as interactive 3D meshes using 'Three.js' via 'htmlwidgets', or render publication-quality static images through 'rgl' and 'rayshader'. A pipe-friendly API lets you map data onto brain regions, control camera angles, toggle region edges, overlay glass brains, and snapshot or ray-trace the result. Additional atlases are available through the 'ggsegverse' r-universe. Mowinckel & Vidal-Piñeiro (2020) <doi:10.1177/2515245920928009>.

Authors:Athanasia Mo Mowinckel [aut, cre], Didac Vidal-Piñeiro [aut], Center for Lifespan Changes in Brain and Cognition, University of Oslo [cph], three.js authors [ctb, cph]

ggseg3d_2.1.2.tar.gz
ggseg3d_2.1.2.zip(r-4.7)ggseg3d_2.1.2.zip(r-4.6)ggseg3d_2.1.2.zip(r-4.5)
ggseg3d_2.1.2.tgz(r-4.6-any)ggseg3d_2.1.2.tgz(r-4.5-any)
ggseg3d_2.1.2.tar.gz(r-4.7-any)ggseg3d_2.1.2.tar.gz(r-4.6-any)
ggseg3d_2.1.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
ggseg3d/json (API)

# Install 'ggseg3d' in R:
install.packages('ggseg3d', repos = c('https://ggsegverse.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/ggsegverse/ggseg3d/issues

Pkgdown/docs site:https://ggsegverse.github.io

On CRAN:

Conda:

8.69 score 45 stars 1 packages 182 scripts 943 downloads 1 mentions 20 exports 63 dependencies

Last updated from:d1f37cf3f3. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK193
source / vignettesOK225
linux-release-x86_64OK177
macos-release-arm64OK85
macos-oldrel-arm64OK108
windows-develOK104
windows-releaseOK128
windows-oldrelOK114
wasm-releaseOK186

Exports:add_glassbrainasegdkggseg3dggseg3dOutputggsegraypan_camerarenderGgseg3dresolve_brain_meshset_backgroundset_dimensionsset_edgesset_flat_shadingset_legendset_orthographicset_positioningsnapshot_braintraculaupdateGgseg3dBackgroundupdateGgseg3dCamera

Dependencies:AsioHeadersbase64encbslibcachemcallrchromoteclicpp11curldigestdplyrevaluatefarverfastmapfontawesomefsgenericsgeometriesggseg.formatsgluehighrhtmltoolshtmlwidgetsjquerylibjsonliteknitrlabelinglaterlifecyclemagrittrmemoisemimeotelpillarpkgconfigprocessxpromisespspurrrR6rappdirsRColorBrewerRcpprlangrmarkdownsassscalessfheadersstringistringrtibbletidyrtidyselecttinytexutf8vctrsviridisLitewebshot2websocketwithrxfunyamlzip

Introduction to ggseg3d
Getting started | Mapping data | Subcortical atlases | Camera and background
Rendered fromggseg3d.Rmdusingknitr::rmarkdown

Last update: 2026-02-21
Started: 2018-12-17

Using ggseg3d in Shiny
Basic Shiny integration | Output sizing | Reactive data | Updating camera and background | Complete example | Performance tips
Rendered fromshiny.Rmdusingknitr::rmarkdown

Last update: 2026-02-21
Started: 2026-02-21